Nemaktis
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Introduction

  • Overview
  • Installation
  • Microscopy model for Nemaktis
  • Accuracy and efficiency of Nemaktis’ backends

High-level python interface

  • Tutorial
  • API Reference

Backends

  • Ray-tracing backend
  • Beam propagation backend
  • Diffractive transfer matrix backend
Nemaktis
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  • Welcome to Nemaktis’s documentation!
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Welcome to Nemaktis’s documentation!¶

Introduction¶

  • Overview
    • License
    • Contributors
    • Highlights
    • Limitations
    • Contact
  • Installation
    • With Conda (windows or linux)
    • Developper method (only linux)
  • Microscopy model for Nemaktis
    • 1. General description
    • 2. Koehler illumination setup
    • 3. Transmission/Reflection of light inside the object
    • 4. Imaging of the object
    • 5. Optical elements for polarized optical micrographs
  • Accuracy and efficiency of Nemaktis’ backends
    • 1. Introduction
    • 2. Results with 2D meshes
    • 3. Results with 3D meshes

High-level python interface¶

  • Tutorial
    • Defining the optical axes
    • Defining a LCMaterial
    • Propagating optical fields through the sample
    • Visualising optical micrographs
  • API Reference
    • TensorField
    • DirectorField
    • QTensorField
    • LCMaterial
    • LightPropagator
    • OpticalFields
    • FieldViewer

Backends¶

  • Ray-tracing backend
  • Beam propagation backend
  • Diffractive transfer matrix backend
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© Copyright 2019, Guilhem Poy, Andrej Petelin Revision 8f95b131.

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